PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA11G0161400.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 101aa    MW: 10995.6 Da    PI: 7.3656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA11G0161400.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-0823631554
                       HHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                HLH 15 riNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                       ++ + +++L+ +lP++ ++ + K  s ae+L++A++YI+ L
  ORGLA11G0161400.1 23 QMAELISKLQAVLPTRGGEANAKqASSAEVLQEACRYIRRL 63
                       78899**********777777787***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-72279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-52363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-72366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MSSSRRSRTS SRLAAAPPPT DEQMAELISK LQAVLPTRGG EANAKQASSA EVLQEACRYI  60
RRLHREADAL SERLAELLLL QPSDLAINGA DVPDLIRSLL M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1113031e-171AK111303.1 Oryza sativa Japonica Group cDNA clone:002-181-B06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616700.13e-65PREDICTED: transcription factor ILI2 isoform X1
SwissprotB8BLA34e-67ILI2_ORYSI; Transcription factor ILI2
SwissprotQ2R1J34e-67ILI2_ORYSJ; Transcription factor ILI2
TrEMBLI1R1H23e-65I1R1H2_ORYGL; Uncharacterized protein
STRINGBGIOSGA033734-PA9e-65(Oryza sativa Indica Group)
STRINGLOC_Os11g39000.19e-65(Oryza sativa Japonica Group)
STRINGORGLA11G0161400.19e-65(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP170041112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39860.17e-12bHLH family protein